Get rid of AppleHDADisabler and VoodooHDA. That's disabling your AppleHDA from loading.
This is normal when you place kexts in any directory. Just run the permission fix and rebuild cache.
Run the last 3 commands until the status 77 is gone.
sudo touch -f /S*/L*/E*
sudo touch -f /L*/E*
sudo kextcache -Boot -U /
Looking through your Clover Kext folder, assuming you're running El Capitan, you should either use 10.11 or Other, not both. Remove the rest of the folders.
Within Other and 10.11 are 3 graphics kexts, you only need 1, they all do the same, one is newer than the other of course.
So get rid of FakePCIID_HD4600_HD4400.kext and FakePCIID_HD.kext and just keep FakePCIID_Intel_HD_Graphics.kext.