You can't use those kexts on Mojave:
IntelGraphicsFixup.kext
IntelGraphicsDVMTFixup.kext
Shiki.kext
You need to use WhateverGreen with DVMT 32MB fix-up patch in your config instead.
This patch needs correct DevicePath in order to work, so you need to find yours with gfxutil first.
$ ./gfxutil -f IGPU
DevicePath = PciRoot(0x0)/Pci(0x2,0x0)
This is correct way to apply this patch
Remove any other graphic patch that you have in your config.
Do not use ApfsDriverLoader-64.efi and apfs.efi together. Same goes for HFSPlus.efi and VBoxHfs-64.efi. It is preferred to use ApfsDriverLoader-64.efi and HFSPlus.efi. At lest VBoxHfs is disabled in your config, but you need to remove apfs.efi.
Your config looks like you added every patch that exists. Use only those that you really need.
USBInjectAll.kext should not be used as a long term solution. As stated in USBInjectAll readme: